Almost Tomorrow The world is now a mess. As the environment with its predictable weather patterns and the economy in dire straights, anarchy is now loose and the world as we knew it is less optimistic. It's been months with no alien activity and the military backing for the Blackwood Project is weakened as the government seems to be in turmoil as well. As if things weren't bad enough, a new group of aliens, the Morthren, have arrived. They have used a process of transmutation to take on human form to protect themselves from Earth's bacteria so the need for hosting bodies and radiation is no more. Under the rule of Malzor, they are instructed by the Eternal Spirit of Morthrai to kill off the "soldiers" who came before and failed to appropriate the planet. Continuing in their mission, they try to snare a member of the Blackwood Team for cloning purposes which will obtain all memories of the original, but totally loyal to the Morthren cause. With this clone, it can more easily infiltrate
While the Blackwood team picks up the pieces and tries to find a new home, the Morthren, too, have to find a new location as they are aware that the humans have been there once and might return. When Harrison and Kincaid go back to the empty base, they find an engram for the aliens' cloning devices that can transport memories and images from the subject to its copy. Meanwhile, Mana and Ardix have cloned a reverend so that he can spread the word of the one true God - the Eternal.
When the Morthren run low on power, they are forced to bring Seft, the High Priestess of Emun, out of stasis. While Seft is searching for the materials she will need to create power crystals for her captors she meets Harrison. Will the link forged between them be enough to save Seft and her son, or is she doomed to forever serve the evil Morthren?
Kincaid runs into an old friend named Johnny, only to discover that his friend is dangerously addicted to drugs. Kincaid takes him to one of the well-known Laporte Rehabilitation Centers, which has just started using a new miracle drug called Krebulax. But something strange is going on at the clinic, and there's something even stranger about the man supplying the drug...a Mister Malcolm.
The Eternal instructs Malzor on how he can go back in time to 1953 in the aftermath of the failed invasion to ensure victory by inoculating his brethren from Earth's bacteria in order to change the course of history in the favour of the Morthren race. However, Blackwood and Kincaid have followed him through the same time tunnel to stop him from succeeding in giving the aliens a huge advantage in their conquest.
While Ardix bargins with a dying millionare's life for access to a communication's satellite, the aliens are trying to kill nosey reporter Marc Traynor. During an assassination attempt, the reporter snaps images of dead alien bodies. To make matters worse, Kincaid and Blackwood are seen killing them. If published, their identities will be revealed and easier for the aliens.